Segments

TotalSegmentator

Tool for segmentation of 104 classes in CT images. It was trained on a wide range of different CT images (different scanners, institutions, protocols,...) and therefore should work well on most images.

GitHub
16
132

Platipy

This project consists of an algorithm to automatically segment the heart plus 17 cardiac sub-structures in typical Radiotherapy CT scans. The hybrid algorithm first segments the whole heart using a deep learning model (nnUNet) followed by a multi-atlas based mapping of the cardiac sub-structures and finally geometric modelling of smaller cardiac structures. The following cardiac structures are generated by the auto-segmentation algorithm.

GitHub
7
84